Vernier Software and Technology
Vernier Software & Technology

Evolution of Cellobiase in Fungi

Introduction

The kingdom Fungi contains the Basidiomycota or club fungi, a group that includes what we call mushrooms. Mushrooms are decomposers that have evolved to grow in diverse environments. The button mushroom (Agaricus bisporus), also known under various names including: common mushroom, table mushroom, and champignon mushroom, is native to grasslands. The oyster mushroom (Pleurotus ostreatus) is typically found on trees and wood. Other mushrooms are mycorhizal, which means that they have evolved symbiotic relationships with the roots of specific trees. The matsutake (Tricholoma magnivelare) and chanterelles (Cantharellus sp.) are examples of mycorhizal mushrooms. Morels, false morels, and truffles are also decomposers, but they are not true mushrooms, they are classified as cup fungi and belong to the group Ascomycota.

In this investigation, you will be studying the cellobiase activity found in different types of club and/or cup fungi. Cellobiase is involved in the last step of the process of breaking down cellulose, a molecule made up of bundled long chains of glucose that are found in plant cell walls, to glucose. This is a natural process that is used by fungi to produce glucose as a food source.

The natural substrate for the enzyme cellobiase is cellobiose. This is a disaccharide composed of two beta glucose molecules. However, when scientists study enzyme function, it is best if there is an easy way to detect either the amount of substrate that is used up or the amount of product that is formed. Solutions of cellobiose (substrate) and glucose (product) are colorless, and there are not many simple methods to detect these molecules quantitatively.

To make this reaction easier to follow, an artificial substrate, p-nitrophenyl glucopyranoside, will be used. This artificial substrate can also bind to the enzyme and be broken down in a manner similar to the natural substrate cellobiose. When the artificial substrate, p-nitrophenyl glucopyranoside, is broken down by cellobiase, it produces glucose and p-nitrophenol. When p-nitrophenol is mixed with a basic solution referred to as the stop solution, it will stop the reaction and turn the solution yellow. The amount of yellow color is proportional to the amount of p-nitrophenol present. For every molecule of p-nitrophenol present, one molecule of p-nitrophenyl glucopyranoside is broken apart. For the cellobiase reactions being run, another advantage of using a basic solution to develop the color of the p-nitrophenol is that the basic pH will also denature the enzyme and stop the reaction.

Objectives

In this Preliminary Activity, you will (1) produce a button mushroom extract, (2) react this cellobiase-containing extract with substrate, (3) collect samples after 1, 2, 3, 4, and 6 minutes of reaction, (4) use a spectrophotometer to measure the absorbances of the colored samples, (5) plot a graph of absorbance vs. time, and (6) use the graph to determine the rate of the cellobiase catalyzed reaction.

After completing the Preliminary Activity, you will first use reference sources to find out more about mushrooms, cellobiase activity, and the evolution and ecology of mushrooms before you choose and investigate a researchable question dealing with cellobiase and the evolution of mushrooms. Some topics to consider in your reference search are:

  • cellulose
  • cellobiose
  • cellobiase
  • basidomycota
  • ascomycota
  • mycorhizal
  • ecology
  • evolution

Sensors and Equipment

This investigation features the following Vernier sensors and equipment.

Additional Requirements

You may also need an interface and software for data collection. What do I need for data collection?

Investigating Biology through Inquiry

See other experiments from the lab book.

1Buffer Investigations
2Diffusion
3Investigating Osmosis
4Chemistry of Membranes
5Investigating Protein
6ATesting Catalase Activity (O2 Gas Sensor)
6BTesting Catalase Activity (Gas Pressure)
6CTesting Enzyme Activity (Spectrometer)
7Introduction to Biofuels: Enzyme Action
8Analysis of Enzymes using Tyrosinase
9Cellular Respiration
10ASugar Metabolism with Yeast (Carbon Dioxide Gas)
10BSugar Metabolism with Yeast (Ethanol)
11Fermentation with Yeast
12Photosynthesis by Chloroplasts
13Transpiration of Plants
14Plant Pigments
15Heart Rate
16Investigating Dissolved Oxygen
17Investigating Primary Productivity
18Modeling Population Dynamics
19Water Monitoring
20Evolution of Cellobiase in Fungi
21Introduction to Molecular Evolution
22Evolution of Yeast

Investigation 20 from Investigating Biology through Inquiry Lab Book

<i>Investigating Biology through Inquiry</i> book cover

Included in the Lab Book

Vernier lab books include word-processing files of the student instructions, essential teacher information, suggested answers, sample data and graphs, and more.

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